Entamoeba histolytica sequence BLAST Search

If BLAST searching is not sufficient and you would like the complete set of unpublished sequences in flatfile format:
  1. See the Status List for the list of available genomes
  2. If the genome(s) you are interested in is on the list, you can request the genome(s) here.
To find out when the data for each genome was last updated, see the status list.
Please read the Policy on Early Data Release.

This server runs WU-BLAST 2.0. [Disclaimer]

Select a program and database to search against:




Upload a file containing a sequence OR paste it into the textbox:

(Note: If both are entered, the file will be ignored.)

Enter the name of the file containing a sequence in FASTA or raw format:

Enter your sequence in FASTA or raw format:

Sequence identifier (for definition line if raw sequence entered):








Wordlength (for blastn only):


Ignore Hypotheticals

Graphical Overview

Map Overview

PID (map overview only)

The email option allows the user to be notified by email when the blast search is completed. The email will contain a link to the results. Use this option when running a lengthy search. To activate this option, check the box to the left and fill in an email address in the box to the right.

Send a link to results to email address:

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